Course in analyzing microarrays using J-express 2009

Summary

This is a 3 day course where J-Express will be used as an analysis tool. This course builds on the Introduction to microarrays course, so knowledge about the microarray technology is expected.

Description

This is a 3 day course where J-Express will be used as an analysis tool. This course builds on the Introduction to microarrays course, so knowledge about the microarray technology is expected. We intend to focus on practical exercises in this course where pre-processed and normalized microarray data will be used as analysis material. The main topics to be covered are:

Quick presentation of the microarray pipeline

Experimental design 

Differential expression

SAM/t-test/Rank Product

Gene Set Analysis

Gene Ontology

Time series

Explorative methods (PCA, clustering etc.)

Quick introduction of R/Bioconductor

Place

University of Oslo, Bygg BL18 Kristine Bonnevies Hus, Blindernvn 31, Rom 1413 PC-stue

Prerequisites

Knowledge about the microarray technology is expected.

Organizers

NMC Oslo

Contact Person(s)

thea (at) microarray.no

Number of Seats

20

Dates

Registration Start
16/10/2009
Registration End
20/11/2009
Course Start
8/12/2009
Course End
10/12/2009
Click here to go to Course Home Page

Video Tutorials Available
Click Here to watch online video tutorials on NeLS-portal, NeLS-Galaxy and StoreBioInfo.
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